You broke the number 1 rule of not having the files go to the name BI is expecting...renaming the New, Alerts, and Stored folders and now it could be all effed up.
From the help file:
By default, there are four folders configured to store recordings—Database, New, Stored, and
Alerts. More precisely, only New and Stored are used to store video files; the Database folder
hosts a series of .dat files which are used by the software to keep track of the other folders,
and the Alerts folder will remain empty unless you have asked for hi-res alert images on the
Record tab in camera settings. These folders should not be renamed. The Alerts folder may
not be used otherwise for direct recording, even if you rename it.
So there are 3 folders you cannot rename - Alerts, New, and Stored - According to your screenshots you renamed the folders they go to - they need to be Alerts, New, and Stored. It are the Aux that you can do renaming. Even though you renamed them, internally they are still Alerts, New, Stored and now they have nowhere to go or are going to wrong places.
Further, is your stored drive in the same box as the new? If so, it makes zero since to move files - wearing out the drives faster and using up CPU? Much better approach is to spread the cameras amongst the drives in the box so if/when a drive fails, you don't lose all your coverage.
You only move from NEW to STORED if it is going to a NAS. If it is the same drive or drives within the computer, it is best to split cameras across the drives.
And then also make sure that you don't have system restore turned on for those video drives as that will take up a chunk of space leading to over-allocation.