yes, jumper cables == patch cables..
your missing the entire point of using the patch panels.. sigh.
okie leme try this.. run all your wires to a central point, this is your cabinet.. nothing goes to anything else directly, everything goes to cabinet.. then from that cabinet you can distribute them to devices within the cabinet, or back out the cabinet to another termination point..
if you want 2 computers right next to eachother wired up directly, you run 2 separate cables all the way to the cabinet.. then patch them together inside the cabinet, electrically its directly connected but physically its: Computer A <--> Patch Panel Port #1 <--> Patch Cable <--> Patch Panel Port #2 <--> Computer B
all ports go to patch panel, from there you can patch them anywhere you like, in any way you can imagine.. and lots of ways you cannot yet, but will someday.
so if you want a bunch of termination points somewhere accessable, outside the rack; put them there.. then wire it to the patch panel and connect it up in there however it needs to be
perhaps this will help, good ole wikipedia to the rescue:
https://en.wikipedia.org/wiki/Patch_panel
many of the facilities I work in have massive patchracks that look like this, man I am glad I dont have to wire this stuff up anymore.